RNA Information
RNA name | Aptamer |
RNA target ID | Target_6 |
Source organism | Synthetic |
Disease involved | - |
RNA sequence | GGGAAGGGAAGAAACUGCGGCUUCGGCCGGCUUCCC |
RNA type | RNA aptamer |
RNA subclass | - |
Target region | - |
Secondary structure | ![]() |
Molecule name | Malachite green |
Molecule ID | Target_lig_308 |
SMILES | CN(C)C1=CC=C(C=C1)C(=C2C=CC(=[N+](C)C)C=C2)C3=CC=CC=C3.[Cl-] |
IUPAC name | [4-[[4-(dimethylamino)phenyl]-phenylmethylidene]cyclohexa-2,5-dien-1-ylidene]-dimethylazanium;chloride |
PubChem CID | 11294 |
2D structure | ![]() |
Radar Plot |
Ka (M-1) | - |
Ki (M) | - |
Kd (M) | 5E-08 |
IC50 (M) | - |
EC50 (M) | - |
3D structure (Experimental)
Experimental method | - |
RNA concentration | - |
Small molecule concentration | - |
pH | - |
Temperature (°C) | - |
Ions present | - |
Reference | - |
Title | - |
Authors | - |
Journal | - |
Volume | - |
Pages | - |
Year | - |
Copyright © 2022 - All Rights Reserved. The database is maintained by Protein Bioinformatics Lab Department of Biotechnology, Indian Institute of Technology Madras |
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