Links and resources related to Ab-CoV Database


Resources used in the development of Ab-CoV database




Resource name Content Link
CoV-AbDab Coronavirus-related antibody resource http://opig.stats.ox.ac.uk/webapps/covabdab/
Thera-SAbDab Therapeutic antibody resource http://opig.stats.ox.ac.uk/webapps/newsabdab/therasabdab/search/
IMGT Collier de Perles 2D representation of antibodies http://www.imgt.org/3Dstructure-DB/cgi/Collier-de-Perles.cgi
ProAffiMuSeq Sequence-based affinity prediction https://web.iitm.ac.in/bioinfo2/proaffimuseq/
mCSM Graph-based affinity and stability prediction http://biosig.unimelb.edu.au/mcsm/
FoldX Structure-based affinity and stability prediction http://foldxsuite.crg.eu/
CUPSAT Structure-based stability prediction http://cupsat.tu-bs.de/
PDBparam Calculates structure based properties https://www.iitm.ac.in/bioinfo/pdbparam/index.html
Protein Interactions Calculator (PIC) Calculates structure based properties http://pic.mbu.iisc.ernet.in/


Other relevant resources



Resource name Content Link
IEDB Epitope database and epitope prediction tools https://www.iedb.org/
IMGT Antibody databse and related tools http://www.imgt.org/
Protein Data Bank Protein structure database https://www.rcsb.org/