Cite us

Please cite us if the use of this tool has helped you in your work and/or resulted in any publication: Divya Sharma, Tracey Baas, Aitor Nogales Gonzalez, Luis Martinez-Sobrido, and M. Michael Gromiha (2023). CoDe: a web-based tool for codon deoptimization. Bioinformatics advances , 3(1), vbac102. [Computer software]. Retrieved from: https://web.iitm.ac.in/bioinfo2/codeop/landing_page.html


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✸ Sharma D, Rawat P, Janakiraman V, Gromiha MM. Elucidating important structural features for the binding affinity of spike - SARS-CoV-2 neutralizing antibody complexes. Proteins. 2022 Mar;90(3):824-834. doi: 10.1002/prot.26277.

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✸ Baker SF, Nogales A,Martínez-Sobrido L. Downregulating viral gene expression: codon usage bias manipulation for the generation of novel influenza A virus vaccines. Future Virol. 2015 Jun;10(6):715-730. doi: 10.2217/fvl.15.31.

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✸ Nogales A, Baker SF, Ortiz-Riaño E, Dewhurst S, Topham DJ,Martínez-Sobrido L. Influenza A virus attenuation by codon deoptimization of the NS gene for vaccine development. J Virol. 2014 Sep;88(18):10525-40. doi: 10.1128/JVI.01565-14.