MPA-Pred is a webserver to calculate the binding affinity (ΔG in kcal/mol) of membrane protein-protein complexes using different sequence- and structure-based features, and classification based on type of membrane protein and protein function. Our method shows a correlation of 0.91 and a MAE of 0.72 in training, and a correlation of 0.83 and a MAE of 0.91 kcal/mol in jack-knife test.
Users can predict the binding affinity giving PDB ID or upload the PDB file. Users can check our tutorial page for help on using the server. If you have any questions, please see our FAQs page. Thank you for using MPA-Pred!