ProCaff IITM

CarbDisMut

Carbohydrate binding proteins Disease Mutations

Statistics of the dataset

Summary of the database

Effect of mutationInsertionDeletionMissenseNonsense
Disease2219343158101650888471
Neutral7137838080107
Number of entries 1208966
Total number of unique carbohydrate binding proteins 7187
Total number of distinct disease mutations 1170330
Total number of distinct proteins in disease mutations 7156
Number of disease mutations in the interface 105489
Total number of distinct neutral mutations 38636
Total number of distinct proteins in neutral mutations 5248
Number of neutral mutations in the interface 4288

The below histogram shows the distribution of ΔΔG values for disease-causing and neutral mutations.



Frequency matrix of neutral mutations (%)

ACDEFGHIKLMNPQRSTVWY
A000.390.2100.72000.010.01000.5200.010.93.462.9600
C00000.110.09000000000.240.23000.060.28
D0.2000.9900.710.4400001.680000.0100.3100.33
E0.3501.07000.65002.120.010000.700.010.010.2300
F00.1000000.1100.73000000.300.1500.14
G0.590.180.830.600000000001.681.7600.610.090
H000.10000000.1400.160.170.470.8800000.65
I00000.230000.040.330.580.15000.020.121.242.4400
K0000.820000.06000.10.5700.321.2400.24000
L0.010.0100.011.1900.080.35000.3100.810.130.340.2801.160.060.01
M00000000.670.110.3900000.0600.751.1900
N000.570.01000.250.170.590000002.10.24000.12
P0.79000000.29002.850000.240.721.960.59000
Q0000.5000.8400.350.21000.2601.1100000.01
R0.012.1400.0100.882.930.040.590.50.0500.423.6500.510.1901.770
S0.370.5000.660.880.010.2301.0301.210.6800.6400.7300.060.26
T1.700.010.010001.450.230.011.710.350.3500.20.870000
V1.3200.110.130.230.2803.1401.071.9700000.010000
W00.130000.050000.060000.010.240.030000
Y00.740.0700.160.010.48000.0100.080000.100.0100

Frequency matrix of disease-causing mutations (%)

A C D E F G H I K L M N P Q R S T V W Y
A 0 0 0.53 0.3 0 0.28 0 0 0 0 0 0 0.3 0 0 1.06 2.91 2.89 0 0
C 0 0 0 0 0.34 0.09 0 0 0 0 0 0 0 0 0.26 0.21 0 0 0.09 0.48
D 0.14 0 0 0.56 0 0.68 0.65 0 0 0 0 2.64 0 0 0 0 0 0.29 0 1.16
E 0.21 0 1.37 0 0 0.61 0 0 4.62 0 0 0 0 1.15 0 0 0 0.33 0 0
F 0 0.22 0 0 0 0 0 0.15 0 0.99 0 0 0 0 0 0.25 0 0.23 0 0.11
G 0.4 0.83 1.12 1.69 0.01 0 0 0 0.03 0.01 0 0.01 0 0 1.84 1.11 0 1.28 0.6 0
H 0 0 0.11 0 0 0 0 0 0 0.13 0 0.39 0.11 0.27 0.38 0 0 0 0 0.84
I 0 0 0 0 0.23 0 0 0 0.04 0.17 0.52 0.2 0 0 0.02 0.14 0.49 0.68 0 0
K 0 0 0 0.53 0 0 0 0.1 0 0 0.18 1.39 0 0.23 0.52 0 0.48 0 0 0
L 0 0 0 0 1.42 0 0.14 0.83 0 0 0.65 0 0.86 0.22 0.38 0.19 0 0.79 0.05 0
M 0 0 0 0 0 0 0 1.04 0.09 0.18 0 0 0 0 0.07 0 0.27 0.38 0 0
N 0 0 0.32 0 0 0 0.18 0.2 0.49 0 0 0 0 0 0 0.68 0.18 0 0 0.15
P 0.36 0 0 0 0.05 0 0.89 0 0 2.92 0 0 0 0.62 0.3 3.14 0.91 0 0 0
Q 0 0 0 0.42 0 0 1.05 0 0.74 0.3 0 0 0.18 0 0.51 0 0 0 0 0
R 0 2.73 0 0 0 0.54 2.61 0.43 0.77 1.05 0.31 0 0.28 2.8 0 0.71 0.31 0 1.98 0
S 0.15 0.72 0 0 2.19 0.36 0 0.46 0 1.57 0 0.76 0.49 0 0.55 0 0.34 0 0.04 0.72
T 0.87 0 0 0 0 0 0 0.99 0.25 0 0.99 0.34 0.25 0 0.12 0.42 0 0 0 0
V 0.86 0 0.12 0.14 0.37 0.29 0 1.23 0 0.77 1.15 0 0 0 0 0 0 0 0 0
W 0 0.32 0 0 0 0.05 0 0 0 0.29 0 0 0 0 0.19 0.05 0 0 0 0
Y 0 0.71 0.08 0 0.17 0 0.42 0 0 0 0 0.14 0 0 0 0.08 0 0 0 0

CarbDisMut

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Protein Bioinformatics Lab,
Department of Biotechnology,
Indian Institute of Technology Madras.

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