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APR Prediction Models
GAP (Generalized Aggregation Proneness)
ANuPP (Prediciton of Nucleating APRs)
V
L
AmY-Pred (Predicting antibody light chain aggregation)
Aggregation Kinetics Prediction Models
AggreRATE-Disc (Classifying Aggregating Point Mutation)
AggreRATE-Pred (Predicting Aggregation Rate for Point Mutation)
AbsoluRATE (Predicting Absolute aggregation rate)
Amylo-Pipe (Comprehensive aggregation prediction)
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Tutorial
Statistics
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Contact Us
Links
APR Prediction Models:
GAP (Generalized Aggregation Proneness)
ANuPP (Prediciton of Nucleating APRs)
V
L
AmY-Pred (Predicting antibody light chain aggregation)
Aggregation Kinetics Prediction Models:
AggreRATE-Disc (Classifying Aggregating Point Mutation)
AggreRATE-Pred (Predicting Aggregation Rate for Point Mutation)
AbsoluRATE (Predicting Absolute aggregation rate)
Amylo-Pipe (Comprehensive aggregation prediction)
Database of known aggregating/non-aggregating peptides
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Peptide Sequence
Protein Name
Entry ID
Peptide length
PMID
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Displaying 1381 to 1410 records out of 2031 records fetched.
Entry
Peptide
Length
Class
Protein Name
UniProt ID
Mutant
Reference
PMID
Source Database
P-1381
WPNGIT
6
Non-amyloid
Low-density lipoprotein receptor (LDL receptor)
P01130
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1382
WPNVIT
6
Amyloid
Low-density lipoprotein receptor (LDL receptor)
P01130
G565V
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1383
WQIVYK
6
amyloid
Microtubule-associated protein tau (PHF-tau)
P10636
V623W
Switch Lab
SwitchLab
Waltz-DB 2.0
P-1384
WSFYLL
6
Non-amyloid
Beta-2-microglobulin
P61769
No
Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4074-8.
16537487
CPAD, Waltz-DB 2.0, AmyLoad
P-1385
WTFNLY
6
Amyloid
Kv channel-interacting protein 1 (KChIP1)
Q9NZI2
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1386
WTVIIE
6
Amyloid
No
Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4074-8.
16537487
CPAD, Waltz-DB 2.0, AmyLoad
P-1387
WTVNYS
6
Amyloid
WD repeat-containing protein 36 (T-cell activation WD repeat-containing protein) (TA-WDRP)
Q8NI36
No
BMC Bioinformatics. 2013;14 Suppl 8:S6.
23815227
CPAD, Waltz-DB 2.0
P-1388
WVENYP
6
Non-amyloid
No
Nat Methods. 2010 Mar;7(3):237-42.
20154676
CPAD, Waltz-DB 2.0, AmyLoad
P-1389
WVFWIG
6
Amyloid
Aquaporin-2 (AQP-2)
P41181
No
Nat Methods. 2010 Mar;7(3):237-42.
20154676
CPAD, Waltz-DB 2.0, AmyLoad
P-1390
WYFYIQ
6
Non-amyloid
No
Nat Methods. 2010 Mar;7(3):237-42.
20154676
CPAD, Waltz-DB 2.0, AmyLoad
P-1391
YAELIV
6
Amyloid
No
Nat Methods. 2010 Mar;7(3):237-42.
20154676
CPAD, Waltz-DB 2.0, AmyLoad
P-1392
YASEIE
6
Non-amyloid
No
Nat Methods. 2010 Mar;7(3):237-42.
20154676
CPAD, Waltz-DB 2.0, AmyLoad
P-1393
YASNNN
6
Non-amyloid
Transcriptional regulatory protein SAP30
P38429
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1394
YATVYV
6
amyloid
Apolipoprotein A-I (ApoA-I)
P02647
L38Y
Switch Lab
SwitchLab
Waltz-DB 2.0
P-1395
YGGGGN
6
Non-amyloid
Major curlin subunit
P28307
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1396
YGGGNS
6
Non-amyloid
Major curlin subunit
P28307
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1397
YGQQNQ
6
Non-amyloid
RNA-binding protein FUS
P35637
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1398
YGQQQS
6
Non-amyloid
RNA-binding protein FUS
P35637
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1399
YGQQSY
6
Non-amyloid
RNA-binding protein FUS
P35637
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1400
YGQSSY
6
Non-amyloid
RNA-binding protein FUS
P35637
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1401
YHLAMA
6
amyloid
No
Sci Rep. 2015 Oct 6;5:14794.
26440769
Waltz-DB 2.0
P-1402
YIFNNC
6
Amyloid
Protein unc-13 homolog B (Munc13-2) (munc13)
O14795
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1403
YIFNNM
6
Non-amyloid
Alpha-mannosidase 2
Q16706
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1404
YKNFNY
6
Non-amyloid
Eukaryotic peptide chain release factor GTP-binding subunit (ERF-3)
P05453
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1405
YLEIII
6
Non-amyloid
No
Nat Methods. 2010 Mar;7(3):237-42.
20154676
CPAD, Waltz-DB 2.0, AmyLoad
P-1406
YLFLQY
6
Amyloid
SLIT and NTRK-like protein 5 (Leucine-rich repeat-containing protein 11)
O94991
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1407
YLGNNS
6
Non-amyloid
[PIN+] prion protein RNQ1
P25367
No
Switch Lab
SwitchLab
Waltz-DB 2.0, AmyLoad
P-1408
YLLWYC
6
Amyloid
Vitronectin (VN) (S-protein) (Serum-spreading factor)
P04004
No
BMC Bioinformatics. 2013;14 Suppl 8:S6.
23815227
CPAD, Waltz-DB 2.0
P-1409
YLLYYT
6
Amyloid
Beta-2-microglobulin
P61769
No
Proc Natl Acad Sci U S A. 2004 Jan 6;101(1):87-92.
14691246
Waltz-DB 2.0, AmyLoad
P-1410
YLNWYQ
6
Amyloid
No
Nat Methods. 2010 Mar;7(3):237-42.
20154676
CPAD, Waltz-DB 2.0, AmyLoad
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Entry: P-1381 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
G
P
W
G
W
K
L
R
W
T
V
A
L
L
L
A
A
A
G
T
A
V
G
D
R
C
E
R
N
E
F
Q
C
Q
D
G
K
C
I
S
Y
K
W
V
C
D
G
S
A
E
C
Q
D
G
S
D
E
S
Q
60
61
E
T
C
L
S
V
T
C
K
S
G
D
F
S
C
G
G
R
V
N
R
C
I
P
Q
F
W
R
C
D
G
Q
V
D
C
D
N
G
S
D
E
Q
G
C
P
P
K
T
C
S
Q
D
E
F
R
C
H
D
G
K
120
121
C
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F
V
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D
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D
R
D
C
L
D
G
S
D
E
A
S
C
P
V
L
T
C
G
P
A
S
F
Q
C
N
S
S
T
C
I
P
Q
L
W
A
C
D
N
D
P
D
C
E
D
G
S
D
E
W
180
181
P
Q
R
C
R
G
L
Y
V
F
Q
G
D
S
S
P
C
S
A
F
E
F
H
C
L
S
G
E
C
I
H
S
S
W
R
C
D
G
G
P
D
C
K
D
K
S
D
E
E
N
C
A
V
A
T
C
R
P
D
E
240
241
F
Q
C
S
D
G
N
C
I
H
G
S
R
Q
C
D
R
E
Y
D
C
K
D
M
S
D
E
V
G
C
V
N
V
T
L
C
E
G
P
N
K
F
K
C
H
S
G
E
C
I
T
L
D
K
V
C
N
M
A
R
300
301
D
C
R
D
W
S
D
E
P
I
K
E
C
G
T
N
E
C
L
D
N
N
G
G
C
S
H
V
C
N
D
L
K
I
G
Y
E
C
L
C
P
D
G
F
Q
L
V
A
Q
R
R
C
E
D
I
D
E
C
Q
D
360
361
P
D
T
C
S
Q
L
C
V
N
L
E
G
G
Y
K
C
Q
C
E
E
G
F
Q
L
D
P
H
T
K
A
C
K
A
V
G
S
I
A
Y
L
F
F
T
N
R
H
E
V
R
K
M
T
L
D
R
S
E
Y
T
420
421
S
L
I
P
N
L
R
N
V
V
A
L
D
T
E
V
A
S
N
R
I
Y
W
S
D
L
S
Q
R
M
I
C
S
T
Q
L
D
R
A
H
G
V
S
S
Y
D
T
V
I
S
R
D
I
Q
A
P
D
G
L
A
480
481
V
D
W
I
H
S
N
I
Y
W
T
D
S
V
L
G
T
V
S
V
A
D
T
K
G
V
K
R
K
T
L
F
R
E
N
G
S
K
P
R
A
I
V
V
D
P
V
H
G
F
M
Y
W
T
D
W
G
T
P
A
540
541
K
I
K
K
G
G
L
N
G
V
D
I
Y
S
L
V
T
E
N
I
Q
W
P
N
G
I
T
L
D
L
L
S
G
R
L
Y
W
V
D
S
K
L
H
S
I
S
S
I
D
V
N
G
G
N
R
K
T
I
L
E
600
601
D
E
K
R
L
A
H
P
F
S
L
A
V
F
E
D
K
V
F
W
T
D
I
I
N
E
A
I
F
S
A
N
R
L
T
G
S
D
V
N
L
L
A
E
N
L
L
S
P
E
D
M
V
L
F
H
N
L
T
Q
660
661
P
R
G
V
N
W
C
E
R
T
T
L
S
N
G
G
C
Q
Y
L
C
L
P
A
P
Q
I
N
P
H
S
P
K
F
T
C
A
C
P
D
G
M
L
L
A
R
D
M
R
S
C
L
T
E
A
E
A
A
V
A
720
721
T
Q
E
T
S
T
V
R
L
K
V
S
S
T
A
V
R
T
Q
H
T
T
T
R
P
V
P
D
T
S
R
L
P
G
A
T
P
G
L
T
T
V
E
I
V
T
M
S
H
Q
A
L
G
D
V
A
G
R
G
N
780
781
E
K
K
P
S
S
V
R
A
L
S
I
V
L
P
I
V
L
L
V
F
L
C
L
G
V
F
L
L
W
K
N
W
R
L
K
N
I
N
S
I
N
F
D
N
P
V
Y
Q
K
T
T
E
D
E
V
H
I
C
H
840
841
N
Q
D
G
Y
S
Y
P
S
R
Q
M
V
S
L
E
D
D
V
A
860
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1381
Peptide:
WPNGIT
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P01130
UniProt Name:
LDLR_HUMAN
Protein Name:
Low-density lipoprotein receptor (LDL receptor)
Position:
562-567
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
50.0
NuAPRpred:
-0.51
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-26.2
Area of the profile Above Threshold (AGGRESCAN):
0.16
Best Energy Score (PASTA 2.0):
-0.7
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1382 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
M
G
P
W
G
W
K
L
R
W
T
V
A
L
L
L
A
A
A
G
T
A
V
G
D
R
C
E
R
N
E
F
Q
C
Q
D
G
K
C
I
S
Y
K
W
V
C
D
G
S
A
E
C
Q
D
G
S
D
E
S
Q
60
61
E
T
C
L
S
V
T
C
K
S
G
D
F
S
C
G
G
R
V
N
R
C
I
P
Q
F
W
R
C
D
G
Q
V
D
C
D
N
G
S
D
E
Q
G
C
P
P
K
T
C
S
Q
D
E
F
R
C
H
D
G
K
120
121
C
I
S
R
Q
F
V
C
D
S
D
R
D
C
L
D
G
S
D
E
A
S
C
P
V
L
T
C
G
P
A
S
F
Q
C
N
S
S
T
C
I
P
Q
L
W
A
C
D
N
D
P
D
C
E
D
G
S
D
E
W
180
181
P
Q
R
C
R
G
L
Y
V
F
Q
G
D
S
S
P
C
S
A
F
E
F
H
C
L
S
G
E
C
I
H
S
S
W
R
C
D
G
G
P
D
C
K
D
K
S
D
E
E
N
C
A
V
A
T
C
R
P
D
E
240
241
F
Q
C
S
D
G
N
C
I
H
G
S
R
Q
C
D
R
E
Y
D
C
K
D
M
S
D
E
V
G
C
V
N
V
T
L
C
E
G
P
N
K
F
K
C
H
S
G
E
C
I
T
L
D
K
V
C
N
M
A
R
300
301
D
C
R
D
W
S
D
E
P
I
K
E
C
G
T
N
E
C
L
D
N
N
G
G
C
S
H
V
C
N
D
L
K
I
G
Y
E
C
L
C
P
D
G
F
Q
L
V
A
Q
R
R
C
E
D
I
D
E
C
Q
D
360
361
P
D
T
C
S
Q
L
C
V
N
L
E
G
G
Y
K
C
Q
C
E
E
G
F
Q
L
D
P
H
T
K
A
C
K
A
V
G
S
I
A
Y
L
F
F
T
N
R
H
E
V
R
K
M
T
L
D
R
S
E
Y
T
420
421
S
L
I
P
N
L
R
N
V
V
A
L
D
T
E
V
A
S
N
R
I
Y
W
S
D
L
S
Q
R
M
I
C
S
T
Q
L
D
R
A
H
G
V
S
S
Y
D
T
V
I
S
R
D
I
Q
A
P
D
G
L
A
480
481
V
D
W
I
H
S
N
I
Y
W
T
D
S
V
L
G
T
V
S
V
A
D
T
K
G
V
K
R
K
T
L
F
R
E
N
G
S
K
P
R
A
I
V
V
D
P
V
H
G
F
M
Y
W
T
D
W
G
T
P
A
540
541
K
I
K
K
G
G
L
N
G
V
D
I
Y
S
L
V
T
E
N
I
Q
W
P
N
G
I
T
L
D
L
L
S
G
R
L
Y
W
V
D
S
K
L
H
S
I
S
S
I
D
V
N
G
G
N
R
K
T
I
L
E
600
601
D
E
K
R
L
A
H
P
F
S
L
A
V
F
E
D
K
V
F
W
T
D
I
I
N
E
A
I
F
S
A
N
R
L
T
G
S
D
V
N
L
L
A
E
N
L
L
S
P
E
D
M
V
L
F
H
N
L
T
Q
660
661
P
R
G
V
N
W
C
E
R
T
T
L
S
N
G
G
C
Q
Y
L
C
L
P
A
P
Q
I
N
P
H
S
P
K
F
T
C
A
C
P
D
G
M
L
L
A
R
D
M
R
S
C
L
T
E
A
E
A
A
V
A
720
721
T
Q
E
T
S
T
V
R
L
K
V
S
S
T
A
V
R
T
Q
H
T
T
T
R
P
V
P
D
T
S
R
L
P
G
A
T
P
G
L
T
T
V
E
I
V
T
M
S
H
Q
A
L
G
D
V
A
G
R
G
N
780
781
E
K
K
P
S
S
V
R
A
L
S
I
V
L
P
I
V
L
L
V
F
L
C
L
G
V
F
L
L
W
K
N
W
R
L
K
N
I
N
S
I
N
F
D
N
P
V
Y
Q
K
T
T
E
D
E
V
H
I
C
H
840
841
N
Q
D
G
Y
S
Y
P
S
R
Q
M
V
S
L
E
D
D
V
A
860
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1382
Peptide:
WPNVIT
Length:
6
Classification:
Amyloid
Mutation(s):
G565V
Structure(s):
No structures
Protein Information
UniProt ID:
P01130
UniProt Name:
LDLR_HUMAN
Protein Name:
Low-density lipoprotein receptor (LDL receptor)
Position:
562-567
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
66.67
NuAPRpred:
-0.35
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
16.4
Area of the profile Above Threshold (AGGRESCAN):
1.32
Best Energy Score (PASTA 2.0):
-4.04
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1383 Classification: amyloid
CSV
JSON
Close ×
Sequence
1
M
A
E
P
R
Q
E
F
E
V
M
E
D
H
A
G
T
Y
G
L
G
D
R
K
D
Q
G
G
Y
T
M
H
Q
D
Q
E
G
D
T
D
A
G
L
K
E
S
P
L
Q
T
P
T
E
D
G
S
E
E
P
G
60
61
S
E
T
S
D
A
K
S
T
P
T
A
E
D
V
T
A
P
L
V
D
E
G
A
P
G
K
Q
A
A
A
Q
P
H
T
E
I
P
E
G
T
T
A
E
E
A
G
I
G
D
T
P
S
L
E
D
E
A
A
G
120
121
H
V
T
Q
E
P
E
S
G
K
V
V
Q
E
G
F
L
R
E
P
G
P
P
G
L
S
H
Q
L
M
S
G
M
P
G
A
P
L
L
P
E
G
P
R
E
A
T
R
Q
P
S
G
T
G
P
E
D
T
E
G
180
181
G
R
H
A
P
E
L
L
K
H
Q
L
L
G
D
L
H
Q
E
G
P
P
L
K
G
A
G
G
K
E
R
P
G
S
K
E
E
V
D
E
D
R
D
V
D
E
S
S
P
Q
D
S
P
P
S
K
A
S
P
A
240
241
Q
D
G
R
P
P
Q
T
A
A
R
E
A
T
S
I
P
G
F
P
A
E
G
A
I
P
L
P
V
D
F
L
S
K
V
S
T
E
I
P
A
S
E
P
D
G
P
S
V
G
R
A
K
G
Q
D
A
P
L
E
300
301
F
T
F
H
V
E
I
T
P
N
V
Q
K
E
Q
A
H
S
E
E
H
L
G
R
A
A
F
P
G
A
P
G
E
G
P
E
A
R
G
P
S
L
G
E
D
T
K
E
A
D
L
P
E
P
S
E
K
Q
P
A
360
361
A
A
P
R
G
K
P
V
S
R
V
P
Q
L
K
A
R
M
V
S
K
S
K
D
G
T
G
S
D
D
K
K
A
K
T
S
T
R
S
S
A
K
T
L
K
N
R
P
C
L
S
P
K
H
P
T
P
G
S
S
420
421
D
P
L
I
Q
P
S
S
P
A
V
C
P
E
P
P
S
S
P
K
Y
V
S
S
V
T
S
R
T
G
S
S
G
A
K
E
M
K
L
K
G
A
D
G
K
T
K
I
A
T
P
R
G
A
A
P
P
G
Q
K
480
481
G
Q
A
N
A
T
R
I
P
A
K
T
P
P
A
P
K
T
P
P
S
S
G
E
P
P
K
S
G
D
R
S
G
Y
S
S
P
G
S
P
G
T
P
G
S
R
S
R
T
P
S
L
P
T
P
P
T
R
E
P
540
541
K
K
V
A
V
V
R
T
P
P
K
S
P
S
S
A
K
S
R
L
Q
T
A
P
V
P
M
P
D
L
K
N
V
K
S
K
I
G
S
T
E
N
L
K
H
Q
P
G
G
G
K
V
Q
I
I
N
K
K
L
D
600
601
L
S
N
V
Q
S
K
C
G
S
K
D
N
I
K
H
V
P
G
G
G
S
V
Q
I
V
Y
K
P
V
D
L
S
K
V
T
S
K
C
G
S
L
G
N
I
H
H
K
P
G
G
G
Q
V
E
V
K
S
E
K
660
661
L
D
F
K
D
R
V
Q
S
K
I
G
S
L
D
N
I
T
H
V
P
G
G
G
N
K
K
I
E
T
H
K
L
T
F
R
E
N
A
K
A
K
T
D
H
G
A
E
I
V
Y
K
S
P
V
V
S
G
D
T
720
721
S
P
R
H
L
S
N
V
S
S
T
G
S
I
D
M
V
D
S
P
Q
L
A
T
L
A
D
E
V
S
A
S
L
A
K
Q
G
L
758
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1383
Peptide:
WQIVYK
Length:
6
Classification:
amyloid
Mutation(s):
V623W
Structure(s):
No structures
Protein Information
UniProt ID:
P10636
UniProt Name:
TAU_HUMAN
Protein Name:
Microtubule-associated protein tau (PHF-tau)
Position:
623-628
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0
Derived Information
Net Charge:
1
Absolute Charge:
1
Hydrophobicity:
66.67
NuAPRpred:
0.72
Tango:
8.63
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
50.4
Area of the profile Above Threshold (AGGRESCAN):
3.31
Best Energy Score (PASTA 2.0):
-3.88
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1384 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
S
R
S
V
A
L
A
V
L
A
L
L
S
L
S
G
L
E
A
I
Q
R
T
P
K
I
Q
V
Y
S
R
H
P
A
E
N
G
K
S
N
F
L
N
C
Y
V
S
G
F
H
P
S
D
I
E
V
D
L
L
60
61
K
N
G
E
R
I
E
K
V
E
H
S
D
L
S
F
S
K
D
W
S
F
Y
L
L
Y
Y
T
E
F
T
P
T
E
K
D
E
Y
A
C
R
V
N
H
V
T
L
S
Q
P
K
I
V
K
W
D
R
D
M
119
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1384
Peptide:
WSFYLL
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P61769
UniProt Name:
B2MG_HUMAN
Protein Name:
Beta-2-microglobulin
Position:
80-85
Literature
PMID:
16537487
Reference:
Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4074-8.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
83.33
NuAPRpred:
0.89
Tango:
3.25
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
78.9
Area of the profile Above Threshold (AGGRESCAN):
5.06
Best Energy Score (PASTA 2.0):
-3.07
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1385 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
M
G
A
V
M
G
T
F
S
S
L
Q
T
K
Q
R
R
P
S
K
D
I
A
W
W
Y
Y
Q
Y
Q
R
D
K
I
E
D
E
L
E
M
T
M
V
C
H
R
P
E
G
L
E
Q
L
E
A
Q
T
N
F
T
60
61
K
R
E
L
Q
V
L
Y
R
G
F
K
N
E
C
P
S
G
V
V
N
E
D
T
F
K
Q
I
Y
A
Q
F
F
P
H
G
D
A
S
T
Y
A
H
Y
L
F
N
A
F
D
T
T
Q
T
G
S
V
K
F
E
120
121
D
F
V
T
A
L
S
I
L
L
R
G
T
V
H
E
K
L
R
W
T
F
N
L
Y
D
I
N
K
D
G
Y
I
N
K
E
E
M
M
D
I
V
K
A
I
Y
D
M
M
G
K
Y
T
Y
P
V
L
K
E
D
180
181
T
P
R
Q
H
V
D
V
F
F
Q
K
M
D
K
N
K
D
G
I
V
T
L
D
E
F
L
E
S
C
Q
E
D
D
N
I
M
R
S
L
Q
L
F
Q
N
V
M
227
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1385
Peptide:
WTFNLY
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
Q9NZI2
UniProt Name:
KCIP1_HUMAN
Protein Name:
Kv channel-interacting protein 1 (KChIP1)
Position:
140-145
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
66.67
NuAPRpred:
0.68
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
29.2
Area of the profile Above Threshold (AGGRESCAN):
1.95
Best Energy Score (PASTA 2.0):
-3.04
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1386 Classification: Amyloid
CSV
JSON
Close ×
Peptide details
Entry:
P-1386
Peptide:
WTVIIE
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
16537487
Reference:
Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4074-8.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
-1
Absolute Charge:
1
Hydrophobicity:
66.67
NuAPRpred:
0.99
Tango:
11.66
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
68.7
Area of the profile Above Threshold (AGGRESCAN):
4.52
Best Energy Score (PASTA 2.0):
-6.93
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1387 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
W
T
V
N
Y
S
6
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1387
Peptide:
WTVNYS
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
Q8NI36
UniProt Name:
WDR36_HUMAN
Protein Name:
WD repeat-containing protein 36 (T-cell activation WD repeat-containing protein) (TA-WDRP)
Position:
Literature
PMID:
23815227
Reference:
BMC Bioinformatics. 2013;14 Suppl 8:S6.
source:
CPAD, Waltz-DB 2.0
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
50.0
NuAPRpred:
0.25
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
8.5
Area of the profile Above Threshold (AGGRESCAN):
0.77
Best Energy Score (PASTA 2.0):
-3.4
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1388 Classification: Non-amyloid
CSV
JSON
Close ×
Peptide details
Entry:
P-1388
Peptide:
WVENYP
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
20154676
Reference:
Nat Methods. 2010 Mar;7(3):237-42.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
-1
Absolute Charge:
1
Hydrophobicity:
66.67
NuAPRpred:
-0.41
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-28.6
Area of the profile Above Threshold (AGGRESCAN):
0.24
Best Energy Score (PASTA 2.0):
-0.7
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1389 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
M
W
E
L
R
S
I
A
F
S
R
A
V
F
A
E
F
L
A
T
L
L
F
V
F
F
G
L
G
S
A
L
N
W
P
Q
A
L
P
S
V
L
Q
I
A
M
A
F
G
L
G
I
G
T
L
V
Q
A
L
G
60
61
H
I
S
G
A
H
I
N
P
A
V
T
V
A
C
L
V
G
C
H
V
S
V
L
R
A
A
F
Y
V
A
A
Q
L
L
G
A
V
A
G
A
A
L
L
H
E
I
T
P
A
D
I
R
G
D
L
A
V
N
A
120
121
L
S
N
S
T
T
A
G
Q
A
V
T
V
E
L
F
L
T
L
Q
L
V
L
C
I
F
A
S
T
D
E
R
R
G
E
N
P
G
T
P
A
L
S
I
G
F
S
V
A
L
G
H
L
L
G
I
H
Y
T
G
180
181
C
S
M
N
P
A
R
S
L
A
P
A
V
V
T
G
K
F
D
D
H
W
V
F
W
I
G
P
L
V
G
A
I
L
G
S
L
L
Y
N
Y
V
L
F
P
P
A
K
S
L
S
E
R
L
A
V
L
K
G
L
240
241
E
P
D
T
D
W
E
E
R
E
V
R
R
R
Q
S
V
E
L
H
S
P
Q
S
L
P
R
G
T
K
A
271
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1389
Peptide:
WVFWIG
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P41181
UniProt Name:
AQP2_HUMAN
Protein Name:
Aquaporin-2 (AQP-2)
Position:
202-207
Literature
PMID:
20154676
Reference:
Nat Methods. 2010 Mar;7(3):237-42.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
83.33
NuAPRpred:
1.02
Tango:
157.08
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
88.3
Area of the profile Above Threshold (AGGRESCAN):
5.81
Best Energy Score (PASTA 2.0):
-6.67
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1390 Classification: Non-amyloid
CSV
JSON
Close ×
Peptide details
Entry:
P-1390
Peptide:
WYFYIQ
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
20154676
Reference:
Nat Methods. 2010 Mar;7(3):237-42.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
83.33
NuAPRpred:
0.92
Tango:
211.28
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
78.0
Area of the profile Above Threshold (AGGRESCAN):
5.16
Best Energy Score (PASTA 2.0):
-4.63
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1391 Classification: Amyloid
CSV
JSON
Close ×
Peptide details
Entry:
P-1391
Peptide:
YAELIV
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
20154676
Reference:
Nat Methods. 2010 Mar;7(3):237-42.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
-1
Absolute Charge:
1
Hydrophobicity:
83.33
NuAPRpred:
0.94
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
32.6
Area of the profile Above Threshold (AGGRESCAN):
2.25
Best Energy Score (PASTA 2.0):
-2.11
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1392 Classification: Non-amyloid
CSV
JSON
Close ×
Peptide details
Entry:
P-1392
Peptide:
YASEIE
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
20154676
Reference:
Nat Methods. 2010 Mar;7(3):237-42.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
-2
Absolute Charge:
2
Hydrophobicity:
50.0
NuAPRpred:
0.08
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-30.9
Area of the profile Above Threshold (AGGRESCAN):
0.27
Best Energy Score (PASTA 2.0):
0.58
Aggregate Orientation (PASTA 2.0):
Antiparallel
Entry: P-1393 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
A
R
P
V
N
T
N
A
E
T
E
S
R
G
R
P
T
Q
G
G
G
Y
A
S
N
N
N
G
S
C
N
N
N
N
G
S
N
N
N
N
N
N
N
N
N
N
N
N
N
S
N
N
S
N
N
N
N
G
P
60
61
T
S
S
G
R
T
N
G
K
Q
R
L
T
A
A
Q
Q
Q
Y
I
K
N
L
I
E
T
H
I
T
D
N
H
P
D
L
R
P
K
S
H
P
M
D
F
E
E
Y
T
D
A
F
L
R
R
Y
K
D
H
F
Q
120
121
L
D
V
P
D
N
L
T
L
Q
G
Y
L
L
G
S
K
L
G
A
K
T
Y
S
Y
K
R
N
T
Q
G
Q
H
D
K
R
I
H
K
R
D
L
A
N
V
V
R
R
H
F
D
E
H
S
I
K
E
T
D
C
180
181
I
P
Q
F
I
Y
K
V
K
N
Q
K
K
K
F
K
M
E
F
R
G
201
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1393
Peptide:
YASNNN
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P38429
UniProt Name:
SAP30_YEAST
Protein Name:
Transcriptional regulatory protein SAP30
Position:
23-28
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
33.33
NuAPRpred:
-0.31
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-69.3
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
0.73
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1394 Classification: amyloid
CSV
JSON
Close ×
Sequence
1
M
K
A
A
V
L
T
L
A
V
L
F
L
T
G
S
Q
A
R
H
F
W
Q
Q
D
E
P
P
Q
S
P
W
D
R
V
K
D
L
A
T
V
Y
V
D
V
L
K
D
S
G
R
D
Y
V
S
Q
F
E
G
S
60
61
A
L
G
K
Q
L
N
L
K
L
L
D
N
W
D
S
V
T
S
T
F
S
K
L
R
E
Q
L
G
P
V
T
Q
E
F
W
D
N
L
E
K
E
T
E
G
L
R
Q
E
M
S
K
D
L
E
E
V
K
A
K
120
121
V
Q
P
Y
L
D
D
F
Q
K
K
W
Q
E
E
M
E
L
Y
R
Q
K
V
E
P
L
R
A
E
L
Q
E
G
A
R
Q
K
L
H
E
L
Q
E
K
L
S
P
L
G
E
E
M
R
D
R
A
R
A
H
V
180
181
D
A
L
R
T
H
L
A
P
Y
S
D
E
L
R
Q
R
L
A
A
R
L
E
A
L
K
E
N
G
G
A
R
L
A
E
Y
H
A
K
A
T
E
H
L
S
T
L
S
E
K
A
K
P
A
L
E
D
L
R
Q
240
241
G
L
L
P
V
L
E
S
F
K
V
S
F
L
S
A
L
E
E
Y
T
K
K
L
N
T
Q
267
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1394
Peptide:
YATVYV
Length:
6
Classification:
amyloid
Mutation(s):
L38Y
Structure(s):
No structures
Protein Information
UniProt ID:
P02647
UniProt Name:
APOA1_HUMAN
Protein Name:
Apolipoprotein A-I (ApoA-I)
Position:
38-43
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
83.33
NuAPRpred:
0.68
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
53.1
Area of the profile Above Threshold (AGGRESCAN):
3.41
Best Energy Score (PASTA 2.0):
-4.52
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1395 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
K
L
L
K
V
A
A
I
A
A
I
V
F
S
G
S
A
L
A
G
V
V
P
Q
Y
G
G
G
G
N
H
G
G
G
G
N
N
S
G
P
N
S
E
L
N
I
Y
Q
Y
G
G
G
N
S
A
L
A
L
Q
60
61
T
D
A
R
N
S
D
L
T
I
T
Q
H
G
G
G
N
G
A
D
V
G
Q
G
S
D
D
S
S
I
D
L
T
Q
R
G
F
G
N
S
A
T
L
D
Q
W
N
G
K
N
S
E
M
T
V
K
Q
F
G
G
120
121
G
N
G
A
A
V
D
Q
T
A
S
N
S
S
V
N
V
T
Q
V
G
F
G
N
N
A
T
A
H
Q
Y
151
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1395
Peptide:
YGGGGN
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P28307
UniProt Name:
CSGA_ECOLI
Protein Name:
Major curlin subunit
Position:
26-31
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
16.67
NuAPRpred:
-0.52
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-55.2
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
2.08
Aggregate Orientation (PASTA 2.0):
Antiparallel
Entry: P-1396 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
K
L
L
K
V
A
A
I
A
A
I
V
F
S
G
S
A
L
A
G
V
V
P
Q
Y
G
G
G
G
N
H
G
G
G
G
N
N
S
G
P
N
S
E
L
N
I
Y
Q
Y
G
G
G
N
S
A
L
A
L
Q
60
61
T
D
A
R
N
S
D
L
T
I
T
Q
H
G
G
G
N
G
A
D
V
G
Q
G
S
D
D
S
S
I
D
L
T
Q
R
G
F
G
N
S
A
T
L
D
Q
W
N
G
K
N
S
E
M
T
V
K
Q
F
G
G
120
121
G
N
G
A
A
V
D
Q
T
A
S
N
S
S
V
N
V
T
Q
V
G
F
G
N
N
A
T
A
H
Q
Y
151
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1396
Peptide:
YGGGNS
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P28307
UniProt Name:
CSGA_ECOLI
Protein Name:
Major curlin subunit
Position:
50-55
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
16.67
NuAPRpred:
-0.5
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-55.3
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
2.08
Aggregate Orientation (PASTA 2.0):
Antiparallel
Entry: P-1397 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
A
S
N
D
Y
T
Q
Q
A
T
Q
S
Y
G
A
Y
P
T
Q
P
G
Q
G
Y
S
Q
Q
S
S
Q
P
Y
G
Q
Q
S
Y
S
G
Y
S
Q
S
T
D
T
S
G
Y
G
Q
S
S
Y
S
S
Y
G
Q
60
61
S
Q
N
T
G
Y
G
T
Q
S
T
P
Q
G
Y
G
S
T
G
G
Y
G
S
S
Q
S
S
Q
S
S
Y
G
Q
Q
S
S
Y
P
G
Y
G
Q
Q
P
A
P
S
S
T
S
G
S
Y
G
S
S
S
Q
S
S
120
121
S
Y
G
Q
P
Q
S
G
S
Y
S
Q
Q
P
S
Y
G
G
Q
Q
Q
S
Y
G
Q
Q
Q
S
Y
N
P
P
Q
G
Y
G
Q
Q
N
Q
Y
N
S
S
S
G
G
G
G
G
G
G
G
G
G
N
Y
G
Q
D
180
181
Q
S
S
M
S
S
G
G
G
S
G
G
G
Y
G
N
Q
D
Q
S
G
G
G
G
S
G
G
Y
G
Q
Q
D
R
G
G
R
G
R
G
G
S
G
G
G
G
G
G
G
G
G
G
Y
N
R
S
S
G
G
Y
E
240
241
P
R
G
R
G
G
G
R
G
G
R
G
G
M
G
G
S
D
R
G
G
F
N
K
F
G
G
P
R
D
Q
G
S
R
H
D
S
E
Q
D
N
S
D
N
N
T
I
F
V
Q
G
L
G
E
N
V
T
I
E
S
300
301
V
A
D
Y
F
K
Q
I
G
I
I
K
T
N
K
K
T
G
Q
P
M
I
N
L
Y
T
D
R
E
T
G
K
L
K
G
E
A
T
V
S
F
D
D
P
P
S
A
K
A
A
I
D
W
F
D
G
K
E
F
S
360
361
G
N
P
I
K
V
S
F
A
T
R
R
A
D
F
N
R
G
G
G
N
G
R
G
G
R
G
R
G
G
P
M
G
R
G
G
Y
G
G
G
G
S
G
G
G
G
R
G
G
F
P
S
G
G
G
G
G
G
G
Q
420
421
Q
R
A
G
D
W
K
C
P
N
P
T
C
E
N
M
N
F
S
W
R
N
E
C
N
Q
C
K
A
P
K
P
D
G
P
G
G
G
P
G
G
S
H
M
G
G
N
Y
G
D
D
R
R
G
G
R
G
G
Y
D
480
481
R
G
G
Y
R
G
R
G
G
D
R
G
G
F
R
G
G
R
G
G
G
D
R
G
G
F
G
P
G
K
M
D
S
R
G
E
H
R
Q
D
R
R
E
R
P
Y
526
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1397
Peptide:
YGQQNQ
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P35637
UniProt Name:
FUS_HUMAN
Protein Name:
RNA-binding protein FUS
Position:
155-160
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
16.67
NuAPRpred:
-0.35
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-92.5
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
1.45
Aggregate Orientation (PASTA 2.0):
Antiparallel
Entry: P-1398 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
A
S
N
D
Y
T
Q
Q
A
T
Q
S
Y
G
A
Y
P
T
Q
P
G
Q
G
Y
S
Q
Q
S
S
Q
P
Y
G
Q
Q
S
Y
S
G
Y
S
Q
S
T
D
T
S
G
Y
G
Q
S
S
Y
S
S
Y
G
Q
60
61
S
Q
N
T
G
Y
G
T
Q
S
T
P
Q
G
Y
G
S
T
G
G
Y
G
S
S
Q
S
S
Q
S
S
Y
G
Q
Q
S
S
Y
P
G
Y
G
Q
Q
P
A
P
S
S
T
S
G
S
Y
G
S
S
S
Q
S
S
120
121
S
Y
G
Q
P
Q
S
G
S
Y
S
Q
Q
P
S
Y
G
G
Q
Q
Q
S
Y
G
Q
Q
Q
S
Y
N
P
P
Q
G
Y
G
Q
Q
N
Q
Y
N
S
S
S
G
G
G
G
G
G
G
G
G
G
N
Y
G
Q
D
180
181
Q
S
S
M
S
S
G
G
G
S
G
G
G
Y
G
N
Q
D
Q
S
G
G
G
G
S
G
G
Y
G
Q
Q
D
R
G
G
R
G
R
G
G
S
G
G
G
G
G
G
G
G
G
G
Y
N
R
S
S
G
G
Y
E
240
241
P
R
G
R
G
G
G
R
G
G
R
G
G
M
G
G
S
D
R
G
G
F
N
K
F
G
G
P
R
D
Q
G
S
R
H
D
S
E
Q
D
N
S
D
N
N
T
I
F
V
Q
G
L
G
E
N
V
T
I
E
S
300
301
V
A
D
Y
F
K
Q
I
G
I
I
K
T
N
K
K
T
G
Q
P
M
I
N
L
Y
T
D
R
E
T
G
K
L
K
G
E
A
T
V
S
F
D
D
P
P
S
A
K
A
A
I
D
W
F
D
G
K
E
F
S
360
361
G
N
P
I
K
V
S
F
A
T
R
R
A
D
F
N
R
G
G
G
N
G
R
G
G
R
G
R
G
G
P
M
G
R
G
G
Y
G
G
G
G
S
G
G
G
G
R
G
G
F
P
S
G
G
G
G
G
G
G
Q
420
421
Q
R
A
G
D
W
K
C
P
N
P
T
C
E
N
M
N
F
S
W
R
N
E
C
N
Q
C
K
A
P
K
P
D
G
P
G
G
G
P
G
G
S
H
M
G
G
N
Y
G
D
D
R
R
G
G
R
G
G
Y
D
480
481
R
G
G
Y
R
G
R
G
G
D
R
G
G
F
R
G
G
R
G
G
G
D
R
G
G
F
G
P
G
K
M
D
S
R
G
E
H
R
Q
D
R
R
E
R
P
Y
526
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1398
Peptide:
YGQQQS
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P35637
UniProt Name:
FUS_HUMAN
Protein Name:
RNA-binding protein FUS
Position:
143-148
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
16.67
NuAPRpred:
-0.44
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-82.2
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
0.95
Aggregate Orientation (PASTA 2.0):
Antiparallel
Entry: P-1399 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
A
S
N
D
Y
T
Q
Q
A
T
Q
S
Y
G
A
Y
P
T
Q
P
G
Q
G
Y
S
Q
Q
S
S
Q
P
Y
G
Q
Q
S
Y
S
G
Y
S
Q
S
T
D
T
S
G
Y
G
Q
S
S
Y
S
S
Y
G
Q
60
61
S
Q
N
T
G
Y
G
T
Q
S
T
P
Q
G
Y
G
S
T
G
G
Y
G
S
S
Q
S
S
Q
S
S
Y
G
Q
Q
S
S
Y
P
G
Y
G
Q
Q
P
A
P
S
S
T
S
G
S
Y
G
S
S
S
Q
S
S
120
121
S
Y
G
Q
P
Q
S
G
S
Y
S
Q
Q
P
S
Y
G
G
Q
Q
Q
S
Y
G
Q
Q
Q
S
Y
N
P
P
Q
G
Y
G
Q
Q
N
Q
Y
N
S
S
S
G
G
G
G
G
G
G
G
G
G
N
Y
G
Q
D
180
181
Q
S
S
M
S
S
G
G
G
S
G
G
G
Y
G
N
Q
D
Q
S
G
G
G
G
S
G
G
Y
G
Q
Q
D
R
G
G
R
G
R
G
G
S
G
G
G
G
G
G
G
G
G
G
Y
N
R
S
S
G
G
Y
E
240
241
P
R
G
R
G
G
G
R
G
G
R
G
G
M
G
G
S
D
R
G
G
F
N
K
F
G
G
P
R
D
Q
G
S
R
H
D
S
E
Q
D
N
S
D
N
N
T
I
F
V
Q
G
L
G
E
N
V
T
I
E
S
300
301
V
A
D
Y
F
K
Q
I
G
I
I
K
T
N
K
K
T
G
Q
P
M
I
N
L
Y
T
D
R
E
T
G
K
L
K
G
E
A
T
V
S
F
D
D
P
P
S
A
K
A
A
I
D
W
F
D
G
K
E
F
S
360
361
G
N
P
I
K
V
S
F
A
T
R
R
A
D
F
N
R
G
G
G
N
G
R
G
G
R
G
R
G
G
P
M
G
R
G
G
Y
G
G
G
G
S
G
G
G
G
R
G
G
F
P
S
G
G
G
G
G
G
G
Q
420
421
Q
R
A
G
D
W
K
C
P
N
P
T
C
E
N
M
N
F
S
W
R
N
E
C
N
Q
C
K
A
P
K
P
D
G
P
G
G
G
P
G
G
S
H
M
G
G
N
Y
G
D
D
R
R
G
G
R
G
G
Y
D
480
481
R
G
G
Y
R
G
R
G
G
D
R
G
G
F
R
G
G
R
G
G
G
D
R
G
G
F
G
P
G
K
M
D
S
R
G
E
H
R
Q
D
R
R
E
R
P
Y
526
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1399
Peptide:
YGQQSY
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P35637
UniProt Name:
FUS_HUMAN
Protein Name:
RNA-binding protein FUS
Position:
33-38
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
33.33
NuAPRpred:
-0.27
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-55.2
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
0.55
Aggregate Orientation (PASTA 2.0):
Antiparallel
Entry: P-1400 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
A
S
N
D
Y
T
Q
Q
A
T
Q
S
Y
G
A
Y
P
T
Q
P
G
Q
G
Y
S
Q
Q
S
S
Q
P
Y
G
Q
Q
S
Y
S
G
Y
S
Q
S
T
D
T
S
G
Y
G
Q
S
S
Y
S
S
Y
G
Q
60
61
S
Q
N
T
G
Y
G
T
Q
S
T
P
Q
G
Y
G
S
T
G
G
Y
G
S
S
Q
S
S
Q
S
S
Y
G
Q
Q
S
S
Y
P
G
Y
G
Q
Q
P
A
P
S
S
T
S
G
S
Y
G
S
S
S
Q
S
S
120
121
S
Y
G
Q
P
Q
S
G
S
Y
S
Q
Q
P
S
Y
G
G
Q
Q
Q
S
Y
G
Q
Q
Q
S
Y
N
P
P
Q
G
Y
G
Q
Q
N
Q
Y
N
S
S
S
G
G
G
G
G
G
G
G
G
G
N
Y
G
Q
D
180
181
Q
S
S
M
S
S
G
G
G
S
G
G
G
Y
G
N
Q
D
Q
S
G
G
G
G
S
G
G
Y
G
Q
Q
D
R
G
G
R
G
R
G
G
S
G
G
G
G
G
G
G
G
G
G
Y
N
R
S
S
G
G
Y
E
240
241
P
R
G
R
G
G
G
R
G
G
R
G
G
M
G
G
S
D
R
G
G
F
N
K
F
G
G
P
R
D
Q
G
S
R
H
D
S
E
Q
D
N
S
D
N
N
T
I
F
V
Q
G
L
G
E
N
V
T
I
E
S
300
301
V
A
D
Y
F
K
Q
I
G
I
I
K
T
N
K
K
T
G
Q
P
M
I
N
L
Y
T
D
R
E
T
G
K
L
K
G
E
A
T
V
S
F
D
D
P
P
S
A
K
A
A
I
D
W
F
D
G
K
E
F
S
360
361
G
N
P
I
K
V
S
F
A
T
R
R
A
D
F
N
R
G
G
G
N
G
R
G
G
R
G
R
G
G
P
M
G
R
G
G
Y
G
G
G
G
S
G
G
G
G
R
G
G
F
P
S
G
G
G
G
G
G
G
Q
420
421
Q
R
A
G
D
W
K
C
P
N
P
T
C
E
N
M
N
F
S
W
R
N
E
C
N
Q
C
K
A
P
K
P
D
G
P
G
G
G
P
G
G
S
H
M
G
G
N
Y
G
D
D
R
R
G
G
R
G
G
Y
D
480
481
R
G
G
Y
R
G
R
G
G
D
R
G
G
F
R
G
G
R
G
G
G
D
R
G
G
F
G
P
G
K
M
D
S
R
G
E
H
R
Q
D
R
R
E
R
P
Y
526
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1400
Peptide:
YGQSSY
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P35637
UniProt Name:
FUS_HUMAN
Protein Name:
RNA-binding protein FUS
Position:
50-55
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
33.33
NuAPRpred:
-0.35
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-36.4
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
0.43
Aggregate Orientation (PASTA 2.0):
Antiparallel
Entry: P-1401 Classification: amyloid
CSV
JSON
Close ×
Sequence
1
Y
H
L
A
M
A
6
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1401
Peptide:
YHLAMA
Length:
6
Classification:
amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
26440769
Reference:
Sci Rep. 2015 Oct 6;5:14794.
source:
Waltz-DB 2.0
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
83.33
NuAPRpred:
-0.04
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
18.4
Area of the profile Above Threshold (AGGRESCAN):
1.25
Best Energy Score (PASTA 2.0):
-0.79
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1402 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
M
S
L
L
C
V
R
V
K
R
A
K
F
Q
G
S
P
D
K
F
N
T
Y
V
T
L
K
V
Q
N
V
K
S
T
T
V
A
V
R
G
D
Q
P
S
W
E
Q
D
F
M
F
E
I
S
R
L
D
L
G
L
60
61
S
V
E
V
W
N
K
G
L
I
W
D
T
M
V
G
T
V
W
I
A
L
K
T
I
R
Q
S
D
E
E
G
P
G
E
W
S
T
L
E
A
E
T
L
M
K
D
D
E
I
C
G
T
R
N
P
T
P
H
K
120
121
I
L
L
D
T
R
F
E
L
P
F
D
I
P
E
E
E
A
R
Y
W
T
Y
K
W
E
Q
I
N
A
L
G
A
D
N
E
Y
S
S
Q
E
E
S
Q
R
K
P
L
P
T
A
A
A
Q
C
S
F
E
D
P
180
181
D
S
A
V
D
D
R
D
S
D
Y
R
S
E
T
S
N
S
F
P
P
P
Y
H
T
A
S
Q
P
N
A
S
V
H
Q
F
P
V
P
V
R
S
P
Q
Q
L
L
L
Q
G
S
S
R
D
S
C
N
D
S
M
240
241
Q
S
Y
D
L
D
Y
P
E
R
R
A
I
S
P
T
S
S
S
R
Y
G
S
S
C
N
V
S
Q
G
S
S
Q
L
S
E
L
D
Q
Y
H
E
Q
D
D
D
H
R
E
T
D
S
I
H
S
C
H
S
S
H
300
301
S
L
S
R
D
G
Q
A
G
F
G
E
Q
E
K
P
L
E
V
T
G
Q
A
E
K
E
A
A
C
E
P
K
E
M
K
E
D
A
T
T
H
P
P
P
D
L
V
L
Q
K
D
H
F
L
G
P
Q
E
S
F
360
361
P
E
E
N
A
S
S
P
F
T
Q
A
R
A
H
W
I
R
A
V
T
K
V
R
L
Q
L
Q
E
I
P
D
D
G
D
P
S
L
P
Q
W
L
P
E
G
P
A
G
G
L
Y
G
I
D
S
M
P
D
L
R
420
421
R
K
K
P
L
P
L
V
S
D
L
S
L
V
Q
S
R
K
A
G
I
T
S
A
M
A
T
R
T
S
L
K
D
E
E
L
K
S
H
V
Y
K
K
T
L
Q
A
L
I
Y
P
I
S
C
T
T
P
H
N
F
480
481
E
V
W
T
A
T
T
P
T
Y
C
Y
E
C
E
G
L
L
W
G
I
A
R
Q
G
M
R
C
S
E
C
G
V
K
C
H
E
K
C
Q
D
L
L
N
A
D
C
L
Q
R
A
A
E
K
S
C
K
H
G
A
540
541
E
D
R
T
Q
N
I
I
M
A
M
K
D
R
M
K
I
R
E
R
N
K
P
E
I
F
E
V
I
R
D
V
F
T
V
N
K
A
A
H
V
Q
Q
M
K
T
V
K
Q
S
V
L
D
G
T
S
K
W
S
A
600
601
K
I
T
I
T
V
V
C
A
Q
G
L
Q
A
K
D
K
T
G
S
S
D
P
Y
V
T
V
Q
V
S
K
T
K
K
R
T
K
T
I
F
G
N
L
N
P
V
W
E
E
K
F
H
F
E
C
H
N
S
S
D
660
661
R
I
K
V
R
V
W
D
E
D
D
D
I
K
S
R
V
K
Q
R
L
K
R
E
S
D
D
F
L
G
Q
T
I
I
E
V
R
T
L
S
G
E
M
D
V
W
Y
N
L
E
K
R
T
D
K
S
A
V
S
G
720
721
A
I
R
L
Q
I
S
V
E
I
K
G
E
E
K
V
A
P
Y
H
V
Q
Y
T
C
L
H
E
N
L
F
H
Y
L
T
D
I
Q
G
S
G
G
V
R
I
P
E
A
R
G
D
D
A
W
K
V
Y
F
D
E
780
781
T
A
Q
E
I
V
D
E
F
A
M
R
Y
G
I
E
S
I
Y
Q
A
M
T
H
F
A
C
L
S
S
K
Y
M
C
P
G
V
P
A
V
M
S
T
L
L
A
N
I
N
A
Y
Y
A
H
T
T
A
S
T
N
840
841
V
S
A
S
D
R
F
A
A
S
N
F
G
K
E
R
F
V
K
L
L
D
Q
L
H
N
S
L
R
I
D
L
S
T
Y
R
N
N
F
P
A
G
S
P
E
R
L
Q
D
L
K
S
T
V
D
L
L
T
S
I
900
901
T
F
F
R
M
K
V
Q
E
L
Q
S
P
P
R
A
S
Q
V
V
K
D
C
V
K
A
C
L
N
S
T
Y
E
Y
I
F
N
N
C
H
D
L
Y
S
R
Q
Y
Q
L
K
Q
E
L
P
P
E
E
Q
G
P
960
961
S
I
R
N
L
D
F
W
P
K
L
I
T
L
I
V
S
I
I
E
E
D
K
N
S
Y
T
P
V
L
N
Q
F
P
Q
E
L
N
V
G
K
V
S
A
E
V
M
W
H
L
F
A
Q
D
M
K
Y
A
L
E
1020
1021
E
H
E
K
D
H
L
C
K
S
A
D
Y
M
N
L
H
F
K
V
K
W
L
H
N
E
Y
V
R
D
L
P
V
L
Q
G
Q
V
P
E
Y
P
A
W
F
E
Q
F
V
L
Q
W
L
D
E
N
E
D
V
S
1080
1081
L
E
F
L
R
G
A
L
E
R
D
K
K
D
G
F
Q
Q
T
S
E
H
A
L
F
S
C
S
V
V
D
V
F
T
Q
L
N
Q
S
F
E
I
I
R
K
L
E
C
P
D
P
S
I
L
A
H
Y
M
R
R
1140
1141
F
A
K
T
I
G
K
V
L
M
Q
Y
A
D
I
L
S
K
D
F
P
A
Y
C
T
K
E
K
L
P
C
I
L
M
N
N
V
Q
Q
L
R
V
Q
L
E
K
M
F
E
A
M
G
G
K
E
L
D
L
E
A
1200
1201
A
D
S
L
K
E
L
Q
V
K
L
N
T
V
L
D
E
L
S
M
V
F
G
N
S
F
Q
V
R
I
D
E
C
V
R
Q
M
A
D
I
L
G
Q
V
R
G
T
G
N
A
S
P
D
A
R
A
S
A
A
Q
1260
1261
D
A
D
S
V
L
R
P
L
M
D
F
L
D
G
N
L
T
L
F
A
T
V
C
E
K
T
V
L
K
R
V
L
K
E
L
W
R
V
V
M
N
T
M
E
R
M
I
V
L
P
P
L
T
D
Q
T
G
T
Q
1320
1321
L
I
F
T
A
A
K
E
L
S
H
L
S
K
L
K
D
H
M
V
R
E
E
T
R
N
L
T
P
K
Q
C
A
V
L
D
L
A
L
D
T
I
K
Q
Y
F
H
A
G
G
N
G
L
K
K
T
F
L
E
K
1380
1381
S
P
D
L
Q
S
L
R
Y
A
L
S
L
Y
T
Q
T
T
D
T
L
I
K
T
F
V
R
S
Q
T
T
Q
G
S
G
V
D
D
P
V
G
E
V
S
I
Q
V
D
L
F
T
H
P
G
T
G
E
H
K
V
1440
1441
T
V
K
V
V
A
A
N
D
L
K
W
Q
T
A
G
M
F
R
P
F
V
E
V
T
M
V
G
P
H
Q
S
D
K
K
R
K
F
T
T
K
S
K
S
N
N
W
A
P
K
Y
N
E
T
F
H
F
L
L
G
1500
1501
N
E
E
G
P
E
S
Y
E
L
Q
I
C
V
K
D
Y
C
F
A
R
E
D
R
V
L
G
L
A
V
M
P
L
R
D
V
T
A
K
G
S
C
A
C
W
C
P
L
G
R
K
I
H
M
D
E
T
G
L
T
1560
1561
I
L
R
I
L
S
Q
R
S
N
D
E
V
A
R
E
F
V
K
L
K
S
E
S
R
S
T
E
E
G
S
1591
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1402
Peptide:
YIFNNC
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
O14795
UniProt Name:
UN13B_HUMAN
Protein Name:
Protein unc-13 homolog B (Munc13-2) (munc13)
Position:
934-939
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
66.67
NuAPRpred:
0.96
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
15.5
Area of the profile Above Threshold (AGGRESCAN):
1.74
Best Energy Score (PASTA 2.0):
-3.32
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1403 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
K
L
S
R
Q
F
T
V
F
G
S
A
I
F
C
V
V
I
F
S
L
Y
L
M
L
D
R
G
H
L
D
Y
P
R
N
P
R
R
E
G
S
F
P
Q
G
Q
L
S
M
L
Q
E
K
I
D
H
L
E
R
60
61
L
L
A
E
N
N
E
I
I
S
N
I
R
D
S
V
I
N
L
S
E
S
V
E
D
G
P
K
S
S
Q
S
N
F
S
Q
G
A
G
S
H
L
L
P
S
Q
L
S
L
S
V
D
T
A
D
C
L
F
A
S
120
121
Q
S
G
S
H
N
S
D
V
Q
M
L
D
V
Y
S
L
I
S
F
D
N
P
D
G
G
V
W
K
Q
G
F
D
I
T
Y
E
S
N
E
W
D
T
E
P
L
Q
V
F
V
V
P
H
S
H
N
D
P
G
W
180
181
L
K
T
F
N
D
Y
F
R
D
K
T
Q
Y
I
F
N
N
M
V
L
K
L
K
E
D
S
R
R
K
F
I
W
S
E
I
S
Y
L
S
K
W
W
D
I
I
D
I
Q
K
K
D
A
V
K
S
L
I
E
N
240
241
G
Q
L
E
I
V
T
G
G
W
V
M
P
D
E
A
T
P
H
Y
F
A
L
I
D
Q
L
I
E
G
H
Q
W
L
E
N
N
I
G
V
K
P
R
S
G
W
A
I
D
P
F
G
H
S
P
T
M
A
Y
L
300
301
L
N
R
A
G
L
S
H
M
L
I
Q
R
V
H
Y
A
V
K
K
H
F
A
L
H
K
T
L
E
F
F
W
R
Q
N
W
D
L
G
S
V
T
D
I
L
C
H
M
M
P
F
Y
S
Y
D
I
P
H
T
C
360
361
G
P
D
P
K
I
C
C
Q
F
D
F
K
R
L
P
G
G
R
F
G
C
P
W
G
V
P
P
E
T
I
H
P
G
N
V
Q
S
R
A
R
M
L
L
D
Q
Y
R
K
K
S
K
L
F
R
T
K
V
L
L
420
421
A
P
L
G
D
D
F
R
Y
C
E
Y
T
E
W
D
L
Q
F
K
N
Y
Q
Q
L
F
D
Y
M
N
S
Q
S
K
F
K
V
K
I
Q
F
G
T
L
S
D
F
F
D
A
L
D
K
A
D
E
T
Q
R
D
480
481
K
G
Q
S
M
F
P
V
L
S
G
D
F
F
T
Y
A
D
R
D
D
H
Y
W
S
G
Y
F
T
S
R
P
F
Y
K
R
M
D
R
I
M
E
S
H
L
R
A
A
E
I
L
Y
Y
F
A
L
R
Q
A
H
540
541
K
Y
K
I
N
K
F
L
S
S
S
L
Y
T
A
L
T
E
A
R
R
N
L
G
L
F
Q
H
H
D
A
I
T
G
T
A
K
D
W
V
V
V
D
Y
G
T
R
L
F
H
S
L
M
V
L
E
K
I
I
G
600
601
N
S
A
F
L
L
I
L
K
D
K
L
T
Y
D
S
Y
S
P
D
T
F
L
E
M
D
L
K
Q
K
S
Q
D
S
L
P
Q
K
N
I
I
R
L
S
A
E
P
R
Y
L
V
V
Y
N
P
L
E
Q
D
R
660
661
I
S
L
V
S
V
Y
V
S
S
P
T
V
Q
V
F
S
A
S
G
K
P
V
E
V
Q
V
S
A
V
W
D
T
A
N
T
I
S
E
T
A
Y
E
I
S
F
R
A
H
I
P
P
L
G
L
K
V
Y
K
I
720
721
L
E
S
A
S
S
N
S
H
L
A
D
Y
V
L
Y
K
N
K
V
E
D
S
G
I
F
T
I
K
N
M
I
N
T
E
E
G
I
T
L
E
N
S
F
V
L
L
R
F
D
Q
T
G
L
M
K
Q
M
M
T
780
781
K
E
D
G
K
H
H
E
V
N
V
Q
F
S
W
Y
G
T
T
I
K
R
D
K
S
G
A
Y
L
F
L
P
D
G
N
A
K
P
Y
V
Y
T
T
P
P
F
V
R
V
T
H
G
R
I
Y
S
E
V
T
C
840
841
F
F
D
H
V
T
H
R
V
R
L
Y
H
I
Q
G
I
E
G
Q
S
V
E
V
S
N
I
V
D
I
R
K
V
Y
N
R
E
I
A
M
K
I
S
S
D
I
K
S
Q
N
R
F
Y
T
D
L
N
G
Y
Q
900
901
I
Q
P
R
M
T
L
S
K
L
P
L
Q
A
N
V
Y
P
M
T
T
M
A
Y
I
Q
D
A
K
H
R
L
T
L
L
S
A
Q
S
L
G
V
S
S
L
N
S
G
Q
I
E
V
I
M
D
R
R
L
M
Q
960
961
D
D
N
R
G
L
E
Q
G
I
Q
D
N
K
I
T
A
N
L
F
R
I
L
L
E
K
R
S
A
V
N
T
E
E
E
K
K
S
V
S
Y
P
S
L
L
S
H
I
T
S
S
L
M
N
H
P
V
I
P
M
1020
1021
A
N
K
F
S
S
P
T
L
E
L
Q
G
E
F
S
P
L
Q
S
S
L
P
C
D
I
H
L
V
N
L
R
T
I
Q
S
K
V
G
N
G
H
S
N
E
A
A
L
I
L
H
R
K
G
F
D
C
R
F
S
1080
1081
S
K
G
T
G
L
F
C
S
T
T
Q
G
K
I
L
V
Q
K
L
L
N
K
F
I
V
E
S
L
T
P
S
S
L
S
L
M
H
S
P
P
G
T
Q
N
I
S
E
I
N
L
S
P
M
E
I
S
T
F
R
1140
1141
I
Q
L
R
1144
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1403
Peptide:
YIFNNM
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
Q16706
UniProt Name:
MA2A1_HUMAN
Protein Name:
Alpha-mannosidase 2
Position:
194-199
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
66.67
NuAPRpred:
0.6
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
18.6
Area of the profile Above Threshold (AGGRESCAN):
1.8
Best Energy Score (PASTA 2.0):
-3.43
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1404 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
S
D
S
N
Q
G
N
N
Q
Q
N
Y
Q
Q
Y
S
Q
N
G
N
Q
Q
Q
G
N
N
R
Y
Q
G
Y
Q
A
Y
N
A
Q
A
Q
P
A
G
G
Y
Y
Q
N
Y
Q
G
Y
S
G
Y
Q
Q
G
G
Y
60
61
Q
Q
Y
N
P
D
A
G
Y
Q
Q
Q
Y
N
P
Q
G
G
Y
Q
Q
Y
N
P
Q
G
G
Y
Q
Q
Q
F
N
P
Q
G
G
R
G
N
Y
K
N
F
N
Y
N
N
N
L
Q
G
Y
Q
A
G
F
Q
P
Q
120
121
S
Q
G
M
S
L
N
D
F
Q
K
Q
Q
K
Q
A
A
P
K
P
K
K
T
L
K
L
V
S
S
S
G
I
K
L
A
N
A
T
K
K
V
G
T
K
P
A
E
S
D
K
K
E
E
E
K
S
A
E
T
K
180
181
E
P
T
K
E
P
T
K
V
E
E
P
V
K
K
E
E
K
P
V
Q
T
E
E
K
T
E
E
K
S
E
L
P
K
V
E
D
L
K
I
S
E
S
T
H
N
T
N
N
A
N
V
T
S
A
D
A
L
I
K
240
241
E
Q
E
E
E
V
D
D
E
V
V
N
D
M
F
G
G
K
D
H
V
S
L
I
F
M
G
H
V
D
A
G
K
S
T
M
G
G
N
L
L
Y
L
T
G
S
V
D
K
R
T
I
E
K
Y
E
R
E
A
K
300
301
D
A
G
R
Q
G
W
Y
L
S
W
V
M
D
T
N
K
E
E
R
N
D
G
K
T
I
E
V
G
K
A
Y
F
E
T
E
K
R
R
Y
T
I
L
D
A
P
G
H
K
M
Y
V
S
E
M
I
G
G
A
S
360
361
Q
A
D
V
G
V
L
V
I
S
A
R
K
G
E
Y
E
T
G
F
E
R
G
G
Q
T
R
E
H
A
L
L
A
K
T
Q
G
V
N
K
M
V
V
V
V
N
K
M
D
D
P
T
V
N
W
S
K
E
R
Y
420
421
D
Q
C
V
S
N
V
S
N
F
L
R
A
I
G
Y
N
I
K
T
D
V
V
F
M
P
V
S
G
Y
S
G
A
N
L
K
D
H
V
D
P
K
E
C
P
W
Y
T
G
P
T
L
L
E
Y
L
D
T
M
N
480
481
H
V
D
R
H
I
N
A
P
F
M
L
P
I
A
A
K
M
K
D
L
G
T
I
V
E
G
K
I
E
S
G
H
I
K
K
G
Q
S
T
L
L
M
P
N
K
T
A
V
E
I
Q
N
I
Y
N
E
T
E
N
540
541
E
V
D
M
A
M
C
G
E
Q
V
K
L
R
I
K
G
V
E
E
E
D
I
S
P
G
F
V
L
T
S
P
K
N
P
I
K
S
V
T
K
F
V
A
Q
I
A
I
V
E
L
K
S
I
I
A
A
G
F
S
600
601
C
V
M
H
V
H
T
A
I
E
E
V
H
I
V
K
L
L
H
K
L
E
K
G
T
N
R
K
S
K
K
P
P
A
F
A
K
K
G
M
K
V
I
A
V
L
E
T
E
A
P
V
C
V
E
T
Y
Q
D
Y
660
661
P
Q
L
G
R
F
T
L
R
D
Q
G
T
T
I
A
I
G
K
I
V
K
I
A
E
685
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1404
Peptide:
YKNFNY
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P05453
UniProt Name:
ERF3_YEAST
Protein Name:
Eukaryotic peptide chain release factor GTP-binding subunit (ERF-3)
Position:
101-106
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
1
Absolute Charge:
1
Hydrophobicity:
50.0
NuAPRpred:
0.14
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-15.6
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
-1.28
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1405 Classification: Non-amyloid
CSV
JSON
Close ×
Peptide details
Entry:
P-1405
Peptide:
YLEIII
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
20154676
Reference:
Nat Methods. 2010 Mar;7(3):237-42.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
-1
Absolute Charge:
1
Hydrophobicity:
83.33
NuAPRpred:
1.06
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
62.6
Area of the profile Above Threshold (AGGRESCAN):
4.02
Best Energy Score (PASTA 2.0):
-4.49
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1406 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
M
H
T
C
C
P
P
V
T
L
E
Q
D
L
H
R
K
M
H
S
W
M
L
Q
T
L
A
F
A
V
T
S
L
V
L
S
C
A
E
T
I
D
Y
Y
G
E
I
C
D
N
A
C
P
C
E
E
K
D
G
I
60
61
L
T
V
S
C
E
N
R
G
I
I
S
L
S
E
I
S
P
P
R
F
P
I
Y
H
L
L
L
S
G
N
L
L
N
R
L
Y
P
N
E
F
V
N
Y
T
G
A
S
I
L
H
L
G
S
N
V
I
Q
D
I
120
121
E
T
G
A
F
H
G
L
R
G
L
R
R
L
H
L
N
N
N
K
L
E
L
L
R
D
D
T
F
L
G
L
E
N
L
E
Y
L
Q
V
D
Y
N
Y
I
S
V
I
E
P
N
A
F
G
K
L
H
L
L
Q
180
181
V
L
I
L
N
D
N
L
L
S
S
L
P
N
N
L
F
R
F
V
P
L
T
H
L
D
L
R
G
N
R
L
K
L
L
P
Y
V
G
L
L
Q
H
M
D
K
V
V
E
L
Q
L
E
E
N
P
W
N
C
S
240
241
C
E
L
I
S
L
K
D
W
L
D
S
I
S
Y
S
A
L
V
G
D
V
V
C
E
T
P
F
R
L
H
G
R
D
L
D
E
V
S
K
Q
E
L
C
P
R
R
L
I
S
D
Y
E
M
R
P
Q
T
P
L
300
301
S
T
T
G
Y
L
H
T
T
P
A
S
V
N
S
V
A
T
S
S
S
A
V
Y
K
P
P
L
K
P
P
K
G
T
R
Q
P
N
K
P
R
V
R
P
T
S
R
Q
P
S
K
D
L
G
Y
S
N
Y
G
P
360
361
S
I
A
Y
Q
T
K
S
P
V
P
L
E
C
P
T
A
C
S
C
N
L
Q
I
S
D
L
G
L
N
V
N
C
Q
E
R
K
I
E
S
I
A
E
L
Q
P
K
P
Y
N
P
K
K
M
Y
L
T
E
N
Y
420
421
I
A
V
V
R
R
T
D
F
L
E
A
T
G
L
D
L
L
H
L
G
N
N
R
I
S
M
I
Q
D
R
A
F
G
D
L
T
N
L
R
R
L
Y
L
N
G
N
R
I
E
R
L
S
P
E
L
F
Y
G
L
480
481
Q
S
L
Q
Y
L
F
L
Q
Y
N
L
I
R
E
I
Q
S
G
T
F
D
P
V
P
N
L
Q
L
L
F
L
N
N
N
L
L
Q
A
M
P
S
G
V
F
S
G
L
T
L
L
R
L
N
L
R
S
N
H
F
540
541
T
S
L
P
V
S
G
V
L
D
Q
L
K
S
L
I
Q
I
D
L
H
D
N
P
W
D
C
T
C
D
I
V
G
M
K
L
W
V
E
Q
L
K
V
G
V
L
V
D
E
V
I
C
K
A
P
K
K
F
A
E
600
601
T
D
M
R
S
I
K
S
E
L
L
C
P
D
Y
S
D
V
V
V
S
T
P
T
P
S
S
I
Q
V
P
A
R
T
S
A
V
T
P
A
V
R
L
N
S
T
G
A
P
A
S
L
G
A
G
G
G
A
S
S
660
661
V
P
L
S
V
L
I
L
S
L
L
L
V
F
I
M
S
V
F
V
A
A
G
L
F
V
L
V
M
K
R
R
K
K
N
Q
S
D
H
T
S
T
N
N
S
D
V
S
S
F
N
M
Q
Y
S
V
Y
G
G
G
720
721
G
G
T
G
G
H
P
H
A
H
V
H
H
R
G
P
A
L
P
K
V
K
T
P
A
G
H
V
Y
E
Y
I
P
H
P
L
G
H
M
C
K
N
P
I
Y
R
S
R
E
G
N
S
V
E
D
Y
K
D
L
H
780
781
E
L
K
V
T
Y
S
S
N
H
H
L
Q
Q
Q
Q
Q
P
P
P
P
P
Q
Q
P
Q
Q
Q
P
P
P
Q
L
Q
L
Q
P
G
E
E
E
R
R
E
S
H
H
L
R
S
P
A
Y
S
V
S
T
I
E
P
840
841
R
E
D
L
L
S
P
V
Q
D
A
D
R
F
Y
R
G
I
L
E
P
D
K
H
C
S
T
T
P
A
G
N
S
L
P
E
Y
P
K
F
P
C
S
P
A
A
Y
T
F
S
P
N
Y
D
L
R
R
P
H
Q
900
901
Y
L
H
P
G
A
G
D
S
R
L
R
E
P
V
L
Y
S
P
P
S
A
V
F
V
E
P
N
R
N
E
Y
L
E
L
K
A
K
L
N
V
E
P
D
Y
L
E
V
L
E
K
Q
T
T
F
S
Q
F
958
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1406
Peptide:
YLFLQY
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
O94991
UniProt Name:
SLIK5_HUMAN
Protein Name:
SLIT and NTRK-like protein 5 (Leucine-rich repeat-containing protein 11)
Position:
485-490
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
83.33
NuAPRpred:
0.87
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
69.8
Area of the profile Above Threshold (AGGRESCAN):
4.72
Best Energy Score (PASTA 2.0):
-2.84
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1407 Classification: Non-amyloid
CSV
JSON
Close ×
Sequence
1
M
D
T
D
K
L
I
S
E
A
E
S
H
F
S
Q
G
N
H
A
E
A
V
A
K
L
T
S
A
A
Q
S
N
P
N
D
E
Q
M
S
T
I
E
S
L
I
Q
K
I
A
G
Y
V
M
D
N
R
S
G
G
60
61
S
D
A
S
Q
D
R
A
A
G
G
G
S
S
F
M
N
T
L
M
A
D
S
K
G
S
S
Q
T
Q
L
G
K
L
A
L
L
A
T
V
M
T
H
S
S
N
K
G
S
S
N
R
G
F
D
V
G
T
V
M
120
121
S
M
L
S
G
S
G
G
G
S
Q
S
M
G
A
S
G
L
A
A
L
A
S
Q
F
F
K
S
G
N
N
S
Q
G
Q
G
Q
G
Q
G
Q
G
Q
G
Q
G
Q
G
Q
G
Q
G
S
F
T
A
L
A
S
L
180
181
A
S
S
F
M
N
S
N
N
N
N
Q
Q
G
Q
N
Q
S
S
G
G
S
S
F
G
A
L
A
S
M
A
S
S
F
M
H
S
N
N
N
Q
N
S
N
N
S
Q
Q
G
Y
N
Q
S
Y
Q
N
G
N
Q
N
240
241
S
Q
G
Y
N
N
Q
Q
Y
Q
G
G
N
G
G
Y
Q
Q
Q
Q
G
Q
S
G
G
A
F
S
S
L
A
S
M
A
Q
S
Y
L
G
G
G
Q
T
Q
S
N
Q
Q
Q
Y
N
Q
Q
G
Q
N
N
Q
Q
Q
300
301
Y
Q
Q
Q
G
Q
N
Y
Q
H
Q
Q
Q
G
Q
Q
Q
Q
Q
G
H
S
S
S
F
S
A
L
A
S
M
A
S
S
Y
L
G
N
N
S
N
S
N
S
S
Y
G
G
Q
Q
Q
A
N
E
Y
G
R
P
Q
Q
360
361
N
G
Q
Q
Q
S
N
E
Y
G
R
P
Q
Y
G
G
N
Q
N
S
N
G
Q
H
E
S
F
N
F
S
G
N
F
S
Q
Q
N
N
N
G
N
Q
N
R
Y
405
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1407
Peptide:
YLGNNS
Length:
6
Classification:
Non-amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P25367
UniProt Name:
RNQ1_YEAST
Protein Name:
[PIN+] prion protein RNQ1
Position:
335-340
Literature
PMID:
SwitchLab
Reference:
Switch Lab
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
33.33
NuAPRpred:
-0.27
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
-45.1
Area of the profile Above Threshold (AGGRESCAN):
0.0
Best Energy Score (PASTA 2.0):
0.17
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1408 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
Y
L
L
W
Y
C
6
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1408
Peptide:
YLLWYC
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P04004
UniProt Name:
VTNC_HUMAN
Protein Name:
Vitronectin (VN) (S-protein) (Serum-spreading factor)
Position:
Literature
PMID:
23815227
Reference:
BMC Bioinformatics. 2013;14 Suppl 8:S6.
source:
CPAD, Waltz-DB 2.0
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
100.0
NuAPRpred:
1.04
Tango:
47.68
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
81.8
Area of the profile Above Threshold (AGGRESCAN):
5.37
Best Energy Score (PASTA 2.0):
-3.35
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1409 Classification: Amyloid
CSV
JSON
Close ×
Sequence
1
M
S
R
S
V
A
L
A
V
L
A
L
L
S
L
S
G
L
E
A
I
Q
R
T
P
K
I
Q
V
Y
S
R
H
P
A
E
N
G
K
S
N
F
L
N
C
Y
V
S
G
F
H
P
S
D
I
E
V
D
L
L
60
61
K
N
G
E
R
I
E
K
V
E
H
S
D
L
S
F
S
K
D
W
S
F
Y
L
L
Y
Y
T
E
F
T
P
T
E
K
D
E
Y
A
C
R
V
N
H
V
T
L
S
Q
P
K
I
V
K
W
D
R
D
M
119
Amyloidogenic/non-amyloidogenic residues are highlighed in green background.
Charged and Proline residues are highlighed in light red.
Peptide details
Entry:
P-1409
Peptide:
YLLYYT
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
P61769
UniProt Name:
B2MG_HUMAN
Protein Name:
Beta-2-microglobulin
Position:
83-88
Literature
PMID:
14691246
Reference:
Proc Natl Acad Sci U S A. 2004 Jan 6;101(1):87-92.
source:
Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
83.33
NuAPRpred:
0.81
Tango:
11.63
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
76.6
Area of the profile Above Threshold (AGGRESCAN):
5.07
Best Energy Score (PASTA 2.0):
-2.9
Aggregate Orientation (PASTA 2.0):
Parallel
Entry: P-1410 Classification: Amyloid
CSV
JSON
Close ×
Peptide details
Entry:
P-1410
Peptide:
YLNWYQ
Length:
6
Classification:
Amyloid
Mutation(s):
No
Structure(s):
No structures
Protein Information
UniProt ID:
UniProt Name:
Protein Name:
Position:
Literature
PMID:
20154676
Reference:
Nat Methods. 2010 Mar;7(3):237-42.
source:
CPAD, Waltz-DB 2.0, AmyLoad
Derived Information
Net Charge:
0
Absolute Charge:
0
Hydrophobicity:
66.67
NuAPRpred:
0.74
Tango:
0.0
Derived Information (continued)
Normalized Aggregation Propensity (AGGRESCAN):
9.8
Area of the profile Above Threshold (AGGRESCAN):
1.31
Best Energy Score (PASTA 2.0):
-2.5
Aggregate Orientation (PASTA 2.0):
Parallel